HippDB: A database of readily targeted helical protein-protein interactions.
Bergey et al (2013) Bioinformatics. 29 (21):2806-2807. doi: 10.1093/bioinformatics/btt483
PDF of Open Access paper available from publisher’s website.
Abstract: HippDB catalogs every protein–protein interaction whose structure is available in the Protein Data Bank and which exhibits one or more helices at the interface. The Web site accepts queries on variables such as helix length and sequence, and it provides computational alanine scanning and change in solvent-accessible surface area values for every interfacial residue. HippDB is intended to serve as a starting point for structure-based small molecule and peptidomimetic drug development.